https://slicer.org

3D Slicer image computing platform | 3D Slicer3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.3D Slicer image computing platform | 3D Slicer 3D Slicer Application   Getting Started   Download Support   Training   Documentation   Forum Get Help Solutions SlicerIGT Chest Imaging Platform SlicerDMRI SlicerRT SlicerSalt SlicerMorph SlicerAstro SlicerCMF SlicerRadiomics Developers   Github Developer Guide Quality Dashboard Download Statistics Extensions Contribute About Contact License Citing Commercial Use 3D Slicer Enabled Research Acknowledgments   Twitter   YouTube 3D Slicer image computing platform Download Documentation Developers Training Forum Twitter 3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures. What is 3D Slicer ? Desktop software to solve advanced image computing challenges with a focus on clinical and biomedical applications. Development platform to quickly build and deploy custom solutions for research and commercial products, using free, open source software. Community of knowledgeable users and developers working together to improve medical computing. See 3D Slicer in action Image segmentation Create surgical plans, create high-quality atlases, or training data sets for deep learning using the Segment Editor module. learn more > Lung CT analysis for COVID-19 LungCTAnalyzer extension offers automated lung segmentation and quantative analysis for COVID-19 cases. video > learn more > Surgical navigation 3D Slicer is used in real-time navigation of breast cancer surgery. video > journal article > learn more > AI-assisted segmentation AI-assisted annotation tools can automatically segment anatomical structures using pre-trained or custom models. See this tutorial video > or tutorial material > and Robot-assisted interventions Slicer is connected to a KUKA robot for visualization of 3D models of the robot, the anatomy, and the workspace. Demo at CARS 2014 in Fukuoka, Japan.The system is originally developed at NA-MIC Summer Project Week. learn more > Tractography UKFTractography is a module for computing tractography of DWI images using an unscented Kalman filter. Because of its 2-tensor algorithm, it is able to model fiber crossings and capture many more fibers than a single tensor algorithm. learn more > Tracked ultrasound for needle guidance Tracked ultrasound snapshots enhance needle guidance for percutaneous renal access. video > learn more > Adaptive radiation therapy SlicerRT extension is a radiation therapy toolkit for 3D Slicer, containing DICOM RT import/export, visualization, and analysis. learn more > Real-time 3D ultrasound reconstruction 3D volume is reconstructed from real-time tracked ultrasound using SlicerIGT and SlicerIGSIO extensions video > learn more > Virtual reality Everything that is shown in the 3D view (volume rendering, real-time surgical navigation, tractography, etc.) can be displayed and interacted with in virtual reality using SlicerVR extension. video > learn more > FreeSurfer support Import volumes, segmentations, surfaces from FreeSurfer then edit and analyze them. video > learn more > 1 million downloads 3D Slicer application installers have been downloaded over 1 million times in the past 10 years. learn more > Features The development of 3D Slicer—including its numerous modules, extensions, datasets, pull requests, patches, issues reports, suggestions—is made possible by users, developers, contributors and commercial partners around the world. The National Institutes of Health(NIH) of the USA has been a major contributor through a variety of competitive grants and contracts. See more information about funding sources here. DICOM standard interoperability DICOM import and export, DICOMweb and classic DIMSE networking. Support of a wide range of DICOM information objects, such as 2D, 3D, 4D images, segmentation objects, registration objects, structured reports, parametric maps, RT structure sets, RT plans, RT images, RT dose maps. Artificial Intelligence NVidia Clara AI-based automatic segmentation, segmentation tools for ground truth training data generation, DeepInfer extension for Deep Learning, Tensorflow and MONAI compatibility. Image segmentation Capabilities for 2D/3D/4D image supporting hundreds of segments per image using Segment Editor. Spatial registration Many tools for manual and automatic registration for images, image sequences, and models. 3D markups Define point sets, lines, curves, angles, planes, region of interests and use them for measurements or as inputs in various software modules using Markups module. Cloud-based computing 3D Slicer in web browser, Docker container, or Jupyter notebook kernel. Click here to run Slicer in your web browser now (using free Binder service, may take 1-2 minutes to start). Extensions Over 150 extensions that can be installed and used with the application using the 3D Slicer App Store. Python scripting Live introspection, interface scripting, any Python 3 packages can be installed. Tutorials. 3D printing friendly 3D-printable mesh export, voxel printing support. 4D data support Time sequence visualization and analysis of any data types (volumes, models, segmentations, markups, etc.). Virtual Reality and Augmented Reality Interact with scenes in HTC, Oculus, Windows Mixed Reality systems. Export data to HoloLens. Surgical planning and guidance Real-time data recording, analysis and replay from surgical navigation systems, ultrasound scanners cameras and trackers, OpenIGTLink connection with trackers, scanners. Solutions Each solution represents an application area of 3D Slicer, which may include collection of extensions, tutorials, forum sub-communities, and even custom software distributions tailored to the needs of a specific community. Custom distributions can provide self-contained, end-to-end implementation of specific workflows with simplified user interface. SlicerIGT A software kit for rapid development of Image-Guided Therapy (IGT) applications based on 3D Slicer. Visit Website SlicerRT A Radiation Therapy (RT) research toolkit for 3D Slicer, containing RT features for import/export, analysis & visualization. Visit Website SlicerAstro An Astronomy extension for 3D Slicer providing interactive 3D visual analytics tool for HI (neutral Hydrogen) data. Visit Website Chest Imaging Platform A 3D Slicer extension for the development and translation of known and novel quantitative phenotypes in lung diseases. Visit Website SlicerSalt A dissemination vehicle providing shape analysis methodology based on 3D Slicer. Visit Website SlicerCMF A 3D Slicer extension providing registration, segmentation and quantification modules for dental images analysis. Visit Website SlicerDMRI A 3D Slicer extension enabling Diffusion Magnetic Resonance Imaging (DMRI). Visit Website SlicerMorph A 3D Slicer extension enabling biologists to retrieve, visualize, measure, segment, conduct landmark-based geometric morphometric analyses and animate 3D biological specimens from digital collections of volumetric and surface scans. Visit Website SlicerRadiomics A 3D Slicer extension enabling quantitative characterization of imaging phenotype. Visit Website Commercial Use We invite commercial entities to use 3D Slicer. 3D Slicer is a Free Open Source Software distributed under a BSD style license. The license does not impose restrictions on the use of the software. For details, please see the 3D Slicer Software License Agreement. Learn more about our commercial partners and 3D Slicer based products and product prototypes. Learn More Community 3D Slicer is supported by a growing international user and developer community. Visit the 3D Slicer Forum to connect with community members. To acknowledge 3D Slicer as a platform, please see Citing Slicer. Learn more about 3D Slicer Community Application Getting Started Download Support Training Documentation Forum Get Help Solutions SlicerIGT Chest Imaging Platform SlicerDMRI SlicerRT SlicerSalt SlicerMorph SlicerAstro SlicerCMF SlicerRadiomics Developers Github Developer Guide Quality Dashboard Download Statistics Extensions Contribute About Contact License Citing Commercial Use 3D Slicer Enabled Research Acknowledgments Twitter YouTube Content of this site is Copyright 2024 BWH and 3D Slicer contributors, unless otherwise noted. For questions about the use of this site's content, please see Contact. Last update 2024-09-23. Revision abeefe5.1727678401https://slicer.org

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